Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831514.1_cds_XP_016504546.1_17978
CDS Infomation

[gene=LOC107822505] [db_xref=GeneID:107822505] [protein=probable protein phosphatase 2C 23] [protein_id=XP_016504546.1] [location=join(26147..27370,27592..27705,27932..28196,28465..28580)] [gbkey=CDS]
Sequence

ATGGGTAATGGGATGGGAAAATTGAAGCTTTGTTTCGCCGGAGATGTTGGAGAAATCTCG
AAAAGACACCACGATATCGCCGTGAATCTCTCCGATCATCTCGACGACGTCGGTTTAGGC
CATTCATTTTGCTACATCCGGCCAGACCCTTCTTTCTCCGATGAATCCTCCTCCTCCTCC
TCCTCCTCCTCCTCTACTAACAGCAGCCAAACGACGGTGTTTCGCACCATCTCCGGCGCT
TCCATATCGGCTAACGCTTCCACACCTCTCTCTACTGCACTTTTCGACTTCTACACTTAT
ACTGACATATCGTCTTCAGCTTTCGAAAGCTCACCTTTATTCTCTTCTATTCCTCTTCAA
CCTATCCCCCGAAGATCAGTAGCCTCTATTCGGTCGGGCCCGATCTCCCGAGTTTCTTGC
TCGGGCTCTGGCCCAACCGAGAGGGGATTTGTCTCTGGCCCAATCGAGCGGGGCTATTTA
GTTAGAAGTTTGAGGAAAGTTTTGTCAAGCTCCTTTCTGGGGATTGAAGAAATGAGTTTT
ATAGAGAAGAAGAATAAAATTAATTTGGCTGATGACGTTGAGGGAAATGTACAGTGGGCT
CAGGGAAAAGCAGGGGAAGACAGAGTACATATAGTGGTTTCTGAAGAACATGGTTGGGTT
TTTGTTGGGATTTATGATGGATTTAATGGGCCTGATGCTACAGATTTTCTGTTAAACAAT
CTCTATTCAAATGTCATCAAAGAGCTCAAGAGATTTCCTTGGAATGACAAGTTAGAAATT
TCTGAGGATTCGACGGGTAATGACATTGTTCGATTGGTACATCAGAGTCAAGAATTTGAT
GAGAAGTTGAACAATTTGGGAACAAATGGAGATGCGGGTATTGACCAATTCGATATCTTG
AAGGCGTTATCAGAGGCGTTAAGGAAAACTGAGGCGTCATATTTGGAGATGGCTGATATG
ATGCTAAAGGAGAATCCTGAGTTGGCTTTAATGGGATCTTGTGTTTTAGTAATGTTGTTG
AATGGTAAGGATGTTTACTTCATGAATGTTGGAGATAGTAGAGCACTTTTAGCTCAAAAT
CCTGAATCCGATCCTTTTGATAGCAAATTGGGACGGATAAACGAGGAAAGTCTAAATCTA
AACAGCATTGATGCACTATGTAGAGTTGAATCTAATCTTACTTCTTGTCAACTCACCATG
GATCATACCACATCTGATAAAGAGGAAGTTCTCAGGATTAGAAGTGATCATCCTGATGAT
GTTTCTGTAATTAAAAATGATAGAGTGAAGGGTTCCCTGAAAGTTACTCGAGCTTTCGGG
GCAGGTTATCTCAAAGAGGCCAAATGGAACAATGCACTACTAGAGATGTTCAGAATTAAC
TATATTGGAAATTCCCCTTACATCAACTGTTTGCCATCACTTTACCACCATAAGCTTGGT
CCTAGAGACAGATTTTTGATCTTATCTTCTGATGGACTTTACCAATACTTCACCAACGAA
GAAGCAGTCTCTGAAGTTGAAAACTTCATGTCTATATTCCCTGAGGGAGATCCATCTCAG
CATCTTGTTGAAGAAGTATTATTCAGAGCTGCTAAGAAAGCTGGCATGAATTTCCATGAA
TTACTTGACATACCACCTGGAGATCGTCGACAGTACCATGATGATGTCTCAATTATCATT
ATATCTTTCGAAGGAAAACTATGGCGATCATCTGCTTAA

Peptide Sequence

PEP ID

XP_016504546.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 23 [Nicotiana tabacum]
Sequence

MGNGMGKLKLCFAGDVGEISKRHHDIAVNLSDHLDDVGLGHSFCYIRPDPSFSDESSSSS
SSSSSTNSSQTTVFRTISGASISANASTPLSTALFDFYTYTDISSSAFESSPLFSSIPLQ
PIPRRSVASIRSGPISRVSCSGSGPTERGFVSGPIERGYLVRSLRKVLSSSFLGIEEMSF
IEKKNKINLADDVEGNVQWAQGKAGEDRVHIVVSEEHGWVFVGIYDGFNGPDATDFLLNN
LYSNVIKELKRFPWNDKLEISEDSTGNDIVRLVHQSQEFDEKLNNLGTNGDAGIDQFDIL
KALSEALRKTEASYLEMADMMLKENPELALMGSCVLVMLLNGKDVYFMNVGDSRALLAQN
PESDPFDSKLGRINEESLNLNSIDALCRVESNLTSCQLTMDHTTSDKEEVLRIRSDHPDD
VSVIKNDRVKGSLKVTRAFGAGYLKEAKWNNALLEMFRINYIGNSPYINCLPSLYHHKLG
PRDRFLILSSDGLYQYFTNEEAVSEVENFMSIFPEGDPSQHLVEEVLFRAAKKAGMNFHE
LLDIPPGDRRQYHDDVSIIIISFEGKLWRSSA

Transcript Sequence

Gene sequence data has not been registered.